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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs7619498 chr3:111283441 G/C 2.68E-8 482 16.33 14.03 9.15 KM Plot
THCA rs76203115 chr11:26666971 T/C 0.000288 489 15.87 16.62 9 KM Plot
THCA rs76208111 chr2:48055311 A/G 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs76208768 chr6:24419962 C/T 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs76213362 chr11:8596565 C/G 4.56E-5 488 15.9 16.38 20.07 KM Plot
THCA rs76234844 chr1:220814769 C/T 3.1E-5 481 15.87 16.63 17.17 KM Plot
THCA rs76239460 chr10:81723227 C/T 0.000198 490 15.93 15.9 13.5 KM Plot
THCA rs76244506 chr5:81214961 A/T 0.000263 487 15.93 15 27.82 KM Plot
THCA rs762452 chr10:7845590 A/G 5.85E-6 486 15.17 16.05 15.7 KM Plot
THCA rs762453 chr10:7845769 G/A 6.84E-6 484 15.17 16.05 15.7 KM Plot
THCA rs7625201 chr3:155627906 A/G 0.000203 488 9 14.63 16.47 KM Plot
THCA rs76255497 chr10:104651955 T/C 2.9E-8 488 15.48 17.33 19.1 KM Plot
THCA rs7625952 chr3:157566257 T/C 2.23E-5 485 15.32 16.8 15.77 KM Plot
THCA rs7626633 chr3:67879410 G/A 0.000252 486 15.68 17.6 14.03 KM Plot
THCA rs76267704 chr7:16429813 T/A 1.59E-9 478 15 19.13 18.82 KM Plot